I found a similar topic on CubePilot referrencing the same problem.
I did as was suggested in this article as a test and disabled IMU2 saved and rebooted. Wham immediately got a clean prearm check and 3d locks on my gps’s. The problem appears to be affecting cube black boards and the heating of IMU2 to operate at a acceptable rate for EKF calculations. Any help in how to get around this? Is is safe to operate without IMU2 running?